Olsen lab Publications


Environmental pH and peptide signaling control virulence of Streptococcus pyogenes via a quorum-sensing pathway
Do, H, Makthal, N, VanderWal, AR, Saavedra, MO, Olsen, RJ, Musser, JM & Kumaraswami, M 2019, Nature Communications, vol. 10, no. 1, 2586. https://doi.org/10.1038/s41467-019-10556-8

Integrated analysis of population genomics, transcriptomics and virulence provides novel insights into Streptococcus pyogenes pathogenesis
Kachroo, P, Eraso, JM, Beres, SB, Olsen, RJ, Zhu, L, Nasser, W, Bernard, PE, Cantu, CC, Saavedra, MO, Arredondo, MJ, Strope, B, Do, H, Kumaraswami, M, Vuopio, J, Gröndahl-Yli-Hannuksela, K, Kristinsson, KG, Gottfredsson, M, Pesonen, M, Pensar, J, Davenport, ER, Clark, AG, Corander, J, Caugant, DA, Gaini, S, Magnussen, MD, Kubiak, SL, Nguyen, HAT, Long, SW, Porter, AR, DeLeo, FR & Musser, JM 2019, Nature Genetics, vol. 51, no. 3, pp. 548-559. https://doi.org/10.1038/s41588-018-0343-1

Gene fitness landscape of group A streptococcus during necrotizing myositis
Zhu, L, Olsen, RJ, Beres, SB, Eraso, JM, Saavedra, MO, Kubiak, SL, Cantu, CC, Jenkins, L, Charbonneau, ARL, Waller, AS & Musser, JM 2019, The Journal of clinical investigation, vol. 129, no. 2, pp. 887-901. https://doi.org/10.1172/JCI124994

HPV status in women with high-grade dysplasia on cervical biopsy and preceding negative HPV tests
Ge, Y, Mody, RR, Olsen, RJ, Zhou, H, Luna, E, Armylagos, D, Puntachart, N, Hendrickson, H, Schwartz, MR & Mody, DR 2019, Journal of the American Society of Cytopathology. https://doi.org/10.1016/j.jasc.2019.01.001

From bench to bedside: Evaluation of AHCC supplementation to modulate the host immunity to clear high-risk human papillomavirus infections
Smith, JA, Mathew, L, Gaikwad, A, Rech, B, Burney, MN, Faro, JP, Lucci, JA, Bai, Y, Olsen, RJ & Byrd, TT 2019, Frontiers in Oncology, vol. 9, no. MAR, 173. https://doi.org/10.3389/fonc.2019.00173

RocA Has Serotype-Specific Gene Regulatory and Pathogenesis Activities in Serotype M28 Group A Streptococcus
Bernard, PE, Kachroo, P, Zhu, L, Beres, SB, Eraso, JM, Kajani, Z, Long, SW, Musser, JM & Olsen, RJ 2018, Infection and immunity, vol. 86, no. 11, e00467-18. https://doi.org/10.1128/IAI.00467-18

Using machine learning to predict antimicrobial MICs and associated genomic features for nontyphoidal Salmonella
Nguyen, M, Long, SW, McDermott, PF, Olsen, RJ, Olson, R, Stevens, RL, Tyson, GH, Zhao, S & Davisa, JJ 2019, Journal of Clinical Microbiology, vol. 57, no. 2, e01260. https://doi.org/10.1128/JCM.01260-18

Chlorhexidine bathing and Clostridium difficile infection in a surgical intensive care unit
Bui, LN, Swan, JT, Shirkey, BA, Olsen, RJ, Long, SW & Graviss, EA 2018, The Journal of surgical research, vol. 228, pp. 107-111. https://doi.org/10.1016/j.jss.2018.02.063

Postpartum Group A Streptococcus Case Series: Reach Out to Infection Prevention!
Alexander, AJ, Myers, C, Beres, SB, Olsen, RJ, Musser, JM & Mangino, JE 2018, Open Forum Infectious Diseases, vol. 5, no. 7, pp. ofy159. https://doi.org/10.1093/ofid/ofy159

Human Papillomavirus-Driven Squamous Lesions: High-Risk Genotype Found in Conjunctival Papillomas, Dysplasia, and Carcinoma
Moyer, AB, Roberts, J, Olsen, RJ & Chévez-Barrios, P 2018, The American Journal of dermatopathology, vol. 40, no. 7, pp. 486-490. https://doi.org/10.1097/DAD.0000000000001139

Signaling by a conserved quorum sensing pathway contributes to growth ex vivo and oropharyngeal colonization of human pathogen group A streptococcus
Makthal, N, Do, H, VanderWal, AR, Olsen, RJ, Musser, JM & Kumaraswami, M 2018, Infection and Immunity, vol. 86, no. 5, e00169-18. https://doi.org/10.1128/IAI.00169-18

Creutzfeldt astrocytes may be seen in IDH-wildtype glioblastoma and retain expression of DNA repair and chromatin binding proteins
Ballester, LY, Boghani, Z, Baskin, DS, Britz, GW, Olsen, R, Fuller, GN, Powell, SZ & Cykowski, MD 2018, Brain Pathology, vol. 28, no. 6, pp. 1012-1019. https://doi.org/10.1111/bpa.12604

Next-generation sequencing identifies gene mutations that are predictive of malignancy in residual needle rinses collected from fine-needle aspirations of thyroid nodules
Fuller, MY, Mody, DR, Hull, A, Pepper, K, Hendrickson, H & Olsen, RJ 2018, Archives of Pathology and Laboratory Medicine, vol. 142, no. 2, pp. 178-183. https://doi.org/10.5858/arpa.2017-0136-OA

Updates in Polycythemia Vera
Nagrale, V, Olsen, RJ & Zu, Y 2018, . in C-CJ Chang & R Ohgami (eds), Precision Molecular Pathology of Myeloid Neoplasms. 1st edn, vol. 12, Springer, Switzerland, pp. 115-139. https://doi.org/10.1007/978-3-319-62146-3

Real-time Communication with Health Care Providers through an Online Respiratory Pathogen Laboratory Report
Christensen, PA, Olsen, RJ, Perez, KK, Cernoch, PL & Long, SW 2018, Open Forum Infectious Diseases, vol. 5, no. 12. https://doi.org/10.1093/ofid/ofy322

Genome sequence analysis of emm89 Streptococcus pyogenes strains causing infections in Scotland, 2010–2016
Beres, SB, Olsen, RJ, Saavedra, MO, Ure, R, Reynolds, A, Lindsay, DSJ, Smith, AJ & Musser, JM 2017, Journal of Medical Microbiology, vol. 66, no. 12, 000622, pp. 1765-1773. https://doi.org/10.1099/jmm.0.000622

Developing an in silico minimum inhibitory concentration panel test for Klebsiella pneumonia
Nguyen, M, Brettin, T, Long, SW, Musser, JM, Olsen, RJ, Olson, R, Shukla, M, Stevens, RL, Xia, F, Yoo, H & Davis, JJ 2018, Scientific Reports, vol. 8, no. 1, 421. https://doi.org/10.1038/s41598-017-18972-w

Pancreas metastases from papillary thyroid carcinoma: A review of the literature
Davidson, M, Olsen, RJ, Ewton, AA & Robbins, RJ 2017, Endocrine practice : official journal of the American College of Endocrinology and the American Association of Clinical Endocrinologists, vol. 23, no. 12, pp. 1425-1429. https://doi.org/10.4158/EP-2017-0001


Houston Methodist Variant Viewer: An Application to Support Clinical Laboratory Interpretation of Next-generation Sequencing Data for Cancer
Christensen, PA, Ni, Y, Bao, F, Hendrickson, HL, Greenwood, M, Thomas, JS, Long, SW & Olsen, RJ 2017, Journal of Pathology Informatics, vol. 8, no. 1, A25. https://doi.org/10.4103/jpi.jpi_48_17

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