Publications


HydRA: Deep-learning models for predicting RNA-binding capacity from protein interaction association context and protein sequence;
Jin, W, Brannan, KW, Kapeli, K, Park, SS, Tan, HQ, Gosztyla, ML, Mujumdar, M, Ahdout, J, Henroid, B, Rothamel, K, Xiang, JS, Wong, L & Yeo, GW 2023, , Molecular Cell, vol. 83, no. 14, pp. 2595-2611.e11. https://doi.org/10.1016/j.molcel.2023.06.019

Assessment of compression-induced solid stress, fluid pressure and mechanopathological parameters in cancers in vivo using poroelastography;
Khan, MDHR, Islam, MT, Taraballi, F & Righetti, R 2023, , Physics in Medicine and Biology, vol. 68, no. 13, 135014. https://doi.org/10.1088/1361-6560/acdf39

Reasons for the Sex Bias in Osteoarthritis Research: A Review of Preclinical Studies;
Franke, M, Mancino, C & Taraballi, F 2023, , International journal of molecular sciences, vol. 24, no. 12, 10386. https://doi.org/10.3390/ijms241210386

An ERK5-NRF2 Axis Mediates Senescence-Associated Stemness and Atherosclerosis;
Abe, J-I, Imanishi, M, Li, S, Zhang, A, Ko, KA, Samanthapudi, VSK, Lee, L-L, Bojorges, AP, Gi, YJ, Hobbs, BP, Deswal, A, Herrmann, J, Lin, SH, Chini, EN, Shen, YH, Schadler, KL, Nguyen, T-H-M, Gupte, AA, Reyes-Gibby, C, Yeung, S-CJ, Abe, RJ, Olmsted-Davis, EA, Krishnan, S, Dantzer, R, Palaskas, NL, Cooke, JP, Pownall, HJ, Yoshimoto, M, Fujiwara, K, Hamilton, DJ, Burks, JK, Wang, G, Le, N-T & Kotla, S 2023, , Circulation Research, vol. 133, no. 1, pp. 25-44. https://doi.org/10.1161/CIRCRESAHA.122.322017

Immunomodulatory biomimetic nanoparticles target articular cartilage trauma after systemic administration;
Mancino, C, Pasto, A, De Rosa, E, Dolcetti, L, Rasponi, M, McCulloch, P & Taraballi, F 2023, , Heliyon, vol. 9, no. 6, e16640. https://doi.org/10.1016/j.heliyon.2023.e16640

Coronary microvascular health in symptomatic patients with prior COVID-19 infection: an updated analysis;
Ahmed, AI, Al Rifai, M, Alahdab, F, Saad, JM, Han, Y, Alfawara, MS, Nayfeh, M, Malahfji, M, Nabi, F, Mahmarian, JJ, Cooke, JP, Zoghbi, WA & Al-Mallah, MH 2023, , European Heart Journal Cardiovascular Imaging. https://doi.org/10.1093/ehjci/jead118

Publisher Correction: Epigenetic landscape reveals MECOM as an endothelial lineage regulator;
Lv, J, Meng, S, Gu, Q, Zheng, R, Gao, X, Kim, JD, Chen, M, Xia, B, Zuo, Y, Zhu, S, Zhao, D, Li, Y, Wang, G, Wang, X, Meng, Q, Cao, Q, Cooke, JP, Fang, L, Chen, K & Zhang, L 2023, , Nature Communications, vol. 14, no. 1, 2842, pp. 2842. https://doi.org/10.1038/s41467-023-38708-x

Design and rationale of re-energize fontan: Randomized exercise intervention designed to maximize fitness in fontan patients;
Selamet Tierney, ES, Palaniappan, L, Leonard, M, Long, J, Myers, J, Dávila, T, Lui, MC, Kogan, F, Olson, I, Punn, R, Desai, M, Schneider, LM, Wang, CH, Cooke, JP & Bernstein, D 2023, , American Heart Journal, vol. 259, pp. 68-78. https://doi.org/10.1016/j.ahj.2023.02.006

Microparticle-Delivered Cxcl9 Prolongs Braf Inhibitor Efficacy in Melanoma;
Romano, G, Paradiso, F, Li, P, Shukla, P, Barger, LN, Naggar, OE, Miller, JP, Liang, RJ, Helms, TL, Lazar, AJ, Wargo, JA, Taraballi, F, Costello, JC & Kwong, LN 2023, , Cancer immunology research, vol. 11, no. 5, pp. 558-569. https://doi.org/10.1158/2326-6066.CIR-22-0224

Epigenetic landscape reveals MECOM as an endothelial lineage regulator;
Lv, J, Meng, S, Gu, Q, Zheng, R, Gao, X, Kim, JD, Chen, M, Xia, B, Zuo, Y, Zhu, S, Zhao, D, Li, Y, Wang, G, Wang, X, Meng, Q, Cao, Q, Cooke, JP, Fang, L, Chen, K & Zhang, L 2023, , Nature Communications, vol. 14, no. 1, 2390, pp. 2390. https://doi.org/10.1038/s41467-023-38002-w